Type: Package
Package: ocrRBBR
Title: Explain Gene Expression with Boolean Rules of Chromatin States
Version: 0.1.0
Authors@R: 
    person("Seyed Amir", "Malekpour", , "a.malekpour@ipm.ir", role = c("aut", "cre"))
Description: Infers Boolean rules among cis-regulatory regions using
        paired chromatin accessibility and gene expression data at bulk
        and single-cell levels.  Links regulatory regions to target
        genes, providing insights into gene regulation mechanisms.
License: GPL-3
URL: https://github.com/CompBioIPM/ocrRBBR
Depends: R (>= 4.4)
Imports: doParallel, dplyr, foreach, GenomeInfoDb, GenomicRanges,
        glmnet, Matrix, parallel, rtracklayer, S4Vectors, stats, utils
Config/testthat/edition: 3
Encoding: UTF-8
RoxygenNote: 7.3.3
Config/pak/sysreqs: make libbz2-dev liblzma-dev libxml2-dev libssl-dev
        xz-utils zlib1g-dev
Repository: https://compbioipm.r-universe.dev
Date/Publication: 2026-02-09 18:16:54 UTC
RemoteUrl: https://github.com/compbioipm/ocrrbbr
RemoteRef: HEAD
RemoteSha: a90a92f46222b838768293c2cee890b2578bdd56
NeedsCompilation: no
Packaged: 2026-10-08 09:52:35 UTC; root
Author: Seyed Amir Malekpour [aut, cre]
Maintainer: Seyed Amir Malekpour <a.malekpour@ipm.ir>